onsnetwork.org Report : Visit Site


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    The main IP address: 72.18.132.225,Your server United States,Denver ISP:WeHostWebsites.com  TLD:org CountryCode:US

    The description :menu skip to content home network activity discussion groups members all network activity example open notebooks open source malaria ant ecology and other adventures marine bioacoustics & sustaina...

    This report updates in 09-Aug-2018

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Latitude: 39.739151000977
Longitude: -104.98470306396
Country: United States (US)
City: Denver
Region: Colorado
ISP: WeHostWebsites.com

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menu skip to content home network activity discussion groups members all network activity example open notebooks open source malaria ant ecology and other adventures marine bioacoustics & sustainability ecology of infectious marine diseases [course] chem-bla-ics iheartanthony’s research usefulchem: the bradley lab what is open notebook science? introduction to open science why should you keep an open notebook? intellectual property and open notebook science open notebook platforms maintaining a useful open notebook #scifund university #scifund 201: open notebook science module 1 – what is ons and why do it? module 2: starting an open notebook module 3: the benefits of wordpress about ons network welcome! to a network of open science notebooks. questions? tweet us at @onscience . the latest open science genome annoation – olympia oyster genome annotation results #01 8 august, 2018 0000-0002-2747-368xyesterday, i annotated our olympia oyster genome using wq-maker in just 7hrs!. see that link for run setup and configuration. resul […] kubu4 genome annotation – olympia oyster genome complete – brief note 7 august, 2018 0000-0002-2747-368xwhoa! genome annotation using jetstream/wq-maker that i started this morning is complete!! only 7hrs! more detailed entry coming on […] kubu4 genome annotation – olympia oyster genome using wq-maker instance on jetstream 7 august, 2018 0000-0002-2747-368xyesterday, our xsede startup application (google doc) got approval for 100,000 service units (sus) and 1tb of disk space on xsede/a […] kubu4 bioanalyzer – tanner crab rna isolated with rneasy plus mini kit 1 august, 2018 0000-0002-2747-368xran the four tanner crab rna samples that i isolated yesterday on the seeb lab bioanalyzer 2100 (agilent) using the rna pico 6000 k […] kubu4 rna cleanup – tanner crab rna 31 july, 2018 0000-0002-2747-368xin a continued attempt to figure out what we can do about the tanner crab rna, steven tasked me with using an rneasy kit to cleanup […] kubu4 rna isolation – tanner crab hemolymph using rneasy plus mini kit 31 july, 2018 0000-0002-2747-368xtanner crab rna has proved a bit troublesome. as such, steven asked me to try isolating some rna using the rneasy plus mini kit (qi […] kubu4 mox – over quota: olympia oyster genome annotation progress (using maker 2.31.10) 30 july, 2018 0000-0002-2747-368xupdate 20180730 per this github issue, steven has cleared out files. additionally, it appears that my job has just continued from w […] kubu4 rna cleanup – tanner crab rna pools 19 july, 2018 0000-0002-2747-368xgrace had previously pooled a set of crab rna in preparation for rnaseq. yesterday, we/she concentrated the samples and then quanti […] kubu4 mox – olympia oyster genome annotation progress (using maker 2.31.10) 11 july, 2018 0000-0002-2747-368xtl;dr – it appears to be continuing where it left off! i decided to spend some time to figure out what was actually happening, as i […] kubu4 mox – password-less ssh! 11 july, 2018 0000-0002-2747-368xthe high performance computing (hpc) cluster (called mox) at univ. of washington (uw) frustratingly requires a password when ssh-in […] kubu4 ubuntu – fix “no video signal” issue on emu/roadrunner 5 july, 2018 0000-0002-2747-368xboth apple xserves (emu/roadrunner) running ubuntu (16.04lts) experienced the same issue – the monitor would indicate “no video sig […] kubu4 transposable element mapping – olympia oyster genome assembly, olurida_v081, using repeatmasker 4.07 3 july, 2018 0000-0002-2747-368xi previously performed this analysis using a different version of our ostrea lurida genome assembly. steven asked that i repeat the […] kubu4 library construction – geoduck water filter metagenome with nextera dna flex kit (illumina) 6 june, 2018 0000-0002-2747-368xmade illumina libraries with goeduck metagenome water filter dna i previously isolated on: 20180411 20180426 we used a free nextera […] kubu4 bs-seq mapping – olympia oyster bisulfite sequencing: bismark continued 31 may, 2018 0000-0002-2747-368xpreviously took the analysis just through the mapping, but didn’t realize steven wanted me to fully process the data. so, as en exe […] kubu4 transposable element mapping – crassostrea virginica ncbi genome assembly using repeatmasker 4.07 29 may, 2018 0000-0002-2747-368xgenome used: ncbi gca_002022765.4_c_virginica-3.0 i ran repeatmasker (v4.07) with repbase-20170127 and rmblast 2.6.0 with species s […] kubu4 synthesis of 2-(4-chlorophenyl)-3-oxopentanenitrile (sgs18-1-1) 28 may, 2018 reaction performed by stuart, heath and francis (contributions by jonah, ronan, nathan, jacky, daniel, oliver and erin) this is a repeat of sgs 10-2 […] sgs transposable element mapping – olympia oyster genome assembly using repeatmasker 4.07 23 may, 2018 0000-0002-2747-368xsteven wanted transposable elements (tes) in the olympia oyster genome identified. after some minor struggles, i was able to get re […] kubu4 dna received – sea lice dna from cris gallardo-escarate at universidad de concepción 23 may, 2018 0000-0002-2747-368xreceived caligus tape dna – two samples: female 1 . female 2 . stored in slots h4 and h5 in “sam’s gdna box #2″ in the ftr 213 -20o […] kubu4 software installation – repeatmasker v4.0.7 on emu/roadrunner continued 23 may, 2018 0000-0002-2747-368xafter yesterday’s difficulties getting rmblast to compile, i deleted the folder and went through the build process again. this time […] kubu4 software installation – repeatmasker v4.0.7 on emu/roadrunner 22 may, 2018 0000-0002-2747-368xsteven asked that i re-run some olympia oyster transposable elements analysis using repeatmasker and a newer version of our olympia […] kubu4 above are the 20 most recent posts in our notebooks, but there are many more! click here for the archives, starting at the 21st most recent post. example open notebooks open source malaria ant ecology and other adventures marine bioacoustics & sustainability ecology of infectious marine diseases [course] chem-bla-ics iheartanthony’s research usefulchem by the bradley lab loading join us! browse all notebooks, by our top subjects #oly_reciprocal_final_sampling 16s 18s abalone assembly bacterial culture bb bgi bioanalyzer black abalone bs-seq cdna cfx96 cox cox2 crassostrea gigas crassostrea virginica ctenidia cycloclasticus pugetii cyclooxygenase dg dh digestive gland dna dna isolation dna quantification dnase dnased rna dnazol dna_extraction dneasy eastern oyster eimd etoh precipitation evolution in action fastqc fidalgo_bay gdna gel gel extraction geoduck gill gonad gotaq qpcr probe master mix graphs haliotis cracherodii haliotis rufescens hard clam hemocyte hemolymph illumina immomix ipython notebook jupyter notebook lake trout larvae lean library prep m-mlv malaria mantle martha's vineyard mbd-seq mercenaria mercenaria micro polya purist mox mrna mrna enrichment multiqc nanodrop1000 o'generuler dna ladder mix oa ocean acidification olympia oyster opticon2 oshv orf117 ostrea lurida p18rk7 pacbio pacific herring pacific oyster panopea generosa pcr pcr2.1 pgs pgs1 pgs2 phage pics prostaglandin synthase ptc-200 qiaamp fast dna stool mini kit qpcr qpcr standard curve quast qubit 3.0 qubit dsdna br rad rad-seq red abalone reverse transcription rlov rlov_dna_helicase rna rna isolation rna quantification rna-seq rnalater roadrunner sanger sequencing solid solid libraries syto 13 syto13 trireagent troubleshooting turbo dna-free ultrafree-da vibrio tubiashii water filters whole transcriptome analysis kit withering syndrome ws wsn1 yellow perch username password remember me register tweets by @onscience recently active discussion groups newest | active | popular ons network support active 10 months ago ecology of infectious marine diseases [course] active 3 years, 11 months ago distributed under the terms of the creative commons attribution license , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. proudly

URL analysis for onsnetwork.org


http://onsnetwork.org/kubu4/2018/05/23/transposable-element-mapping-olympia-oyster-genome-assembly-using-repeatmasker-4-07/
http://onsnetwork.org/blog/tag/mrna/
http://onsnetwork.org/members/larsgw/
http://onsnetwork.org/blog/tag/m-mlv/
http://onsnetwork.org/blog/tag/rlov_dna_helicase/
http://onsnetwork.org/members/steven-roberts/
http://onsnetwork.org/blog/tag/qiaamp-fast-dna-stool-mini-kit/
http://onsnetwork.org/about-onsnetwork-org/
http://onsnetwork.org/blog/tag/ultrafree-da/
http://onsnetwork.org/blog/tag/eastern-oyster/
http://onsnetwork.org/blog/tag/bb/
http://onsnetwork.org/blog/tag/pacific-herring/
http://onsnetwork.org/blog/tag/crassostrea-virginica/
http://onsnetwork.org/chemblaics/
http://onsnetwork.org/joinons

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WHOIS LIMIT EXCEEDED - SEE WWW.PIR.ORG/WHOIS FOR DETAILS

  REFERRER http://www.pir.org/

  REGISTRAR Public Interest Registry

SERVERS

  SERVER org.whois-servers.net

  ARGS onsnetwork.org

  PORT 43

  TYPE domain

  REGISTERED unknown

DOMAIN

  NAME onsnetwork.org

NSERVER

  OSF12.OPENSCIENCEFEDERATION.COM 72.18.132.226

  OSF11.OPENSCIENCEFEDERATION.COM 72.18.132.225

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